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1

Quantifying colocalization by correlation: The Pearson correlation coefficient is superior to the Mander's overlap coefficient

Jeremy Adler, Ingela Parmryd

Journal:

Cytometry Part A

Year:

2010

Language:

english

File:

PDF, 599 KB

english, 2010

2

Methyl-beta-cyclodextrin does not preferentially target lipid raft cholesterol

Saleemulla Mahammad, Ingela Parmryd

Journal:

Chemistry and Physics of Lipids

Year:

2007

Language:

english

File:

PDF, 49 KB

english, 2007

3

Distribution of Branch Point Prenyltransferases in Regions of Bovine Brain

M. Runquist, I. Parmryd, A. Thelin, T. Chojnacki, G. Dallner

Journal:

Journal of Neurochemistry

Year:

1995

Language:

english

File:

PDF, 869 KB

english, 1995

4

Radiation-induced DNA damage and repair in human γδ and αβ T-lymphocytes analysed by the alkaline comet assay

Halina Lisowska, Marta Deperas-Kaminska, Siamak Haghdoost, Ingela Parmryd, Andrzej Wojcik

Journal:

Genome Integrity

Year:

2010

Language:

english

File:

PDF, 511 KB

english, 2010

5

Analysis of Bias in the Apparent Correlation Coefficient Between Image Pairs Corrupted by Severe Noise

Fredrik Bergholm, Jeremy Adler, Ingela Parmryd

Journal:

Journal of Mathematical Imaging and Vision

Year:

2010

Language:

english

File:

PDF, 1.11 MB

english, 2010

6

Plasma membrane order in T cell signalling

Jelena Dinic, Jeremy Adler, Ingela Parmryd

Journal:

Chemistry and Physics of Lipids

Year:

2008

Language:

english

File:

PDF, 56 KB

english, 2008

7

Letter to the Editor

Jeremy Adler, Ingela Parmryd

Journal:

Journal of Microscopy

Year:

2007

Language:

english

File:

PDF, 417 KB

english, 2007

8

Replicate-based noise corrected correlation for accurate measurements of colocalization

J. ADLER, S. N. PAGAKIS, I. PARMRYD

Journal:

Journal of Microscopy

Year:

2008

Language:

english

File:

PDF, 901 KB

english, 2008

9

Plasma membrane topography and interpretation of single-particle tracks

Adler, Jeremy, Shevchuk, Andrew I, Novak, Pavel, Korchev, Yuri E, Parmryd, Ingela

Journal:

Year:

2010

Language:

english

File:

PDF, 284 KB

english, 2010

10

Identification of Spinach Farnesyl Protein Transferase : Dithiothreitol as an Acceptor in Vitro

Ingela Parmryd, Catherine A. Shipton, Ewa Swiezewska, Bertil Andersson, Gustav Dallner

Journal:

Year:

1995

Language:

english

File:

PDF, 1.03 MB

english, 1995

11

Protein Prenylation in Spinach—Tissue Specificity and Greening-Induced Changes

Ingela Parmryd, Catherine Ann Shipton, Bertil Andersson, Gustav Dallner

Journal:

Archives of Biochemistry and Biophysics

Year:

1997

Language:

english

File:

PDF, 156 KB

english, 1997

12

In VivoPrenylation of Rat Proteins: Modification of Proteins with Penta- and Hexaprenyl Groups

Ingela Parmryd, Gustav Dallner

Journal:

Archives of Biochemistry and Biophysics

Year:

1999

Language:

english

File:

PDF, 112 KB

english, 1999

13

Limited cholesterol depletion causes aggregation of plasma membrane lipid rafts inducing T cell activation

Saleemulla Mahammad, Jelena Dinic, Jeremy Adler, Ingela Parmryd

Journal:

Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids

Year:

2010

Language:

english

File:

PDF, 1.48 MB

english, 2010

14

Cholesterol homeostasis in T cells. Methyl-β-cyclodextrin treatment results in equal loss of cholesterol from Triton X-100 soluble and insoluble fractions

Saleemulla Mahammad, Ingela Parmryd

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2008

Language:

english

File:

PDF, 531 KB

english, 2008

15

Laurdan and di-4-ANEPPDHQ do not respond to membrane-inserted peptides and are good probes for lipid packing

Jelena Dinic, Henrik Biverståhl, Lena Mäler, Ingela Parmryd

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2011

Language:

english

File:

PDF, 999 KB

english, 2011

16

Imaging metabolism of phosphatidylinositol 4,5-bisphosphate in t-cell GM1-enriched domains containing Ras proteins☆

Ingela Parmryd, Jeremy Adler, Roopal Patel, Anthony I. Magee

Journal:

Experimental Cell Research

Year:

2003

Language:

english

File:

PDF, 607 KB

english, 2003

17

Chloroplastic prenylated proteins

Ingela Parmryd, Catherine Ann Shipton, Ewa Swiezewska, Gustav Dallner, Bertil Andersson

Journal:

Year:

1997

Language:

english

File:

PDF, 661 KB

english, 1997

18

Subcellular distribution of farnesyl protein transferase in rat liver

Jacob Grünler, Ingela Parmryd

Journal:

Year:

1999

Language:

english

File:

PDF, 168 KB

english, 1999

19

Actin filaments attachment at the plasma membrane in live cells cause the formation of ordered lipid domains

Dinic, Jelena, Ashrafzadeh, Parham, Parmryd, Ingela

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2013

Language:

english

File:

PDF, 762 KB

english, 2013

20

Plasma Membrane Order In T Cell Signalling

Dinic, Jelena, Adler, Jeremy, Parmryd, Ingela

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 37 KB

english, 2009

21

Detergent-resistant membranes and the protein composition of lipid rafts

Anthony I Magee, Ingela Parmryd

Journal:

Year:

2003

Language:

english

File:

PDF, 237 KB

english, 2003

22

A strong Correlation Between Ordered Plasma Membrane Domains and Actin Filaments in Live Cells

Dinic, Jelena, Parmryd, Ingela

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 67 KB

english, 2011

23

Plasma Membrane Topology and Membrane Models

Parmryd, Ingela, Adler, Jeremy

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 67 KB

english, 2009

24

Movement on Uneven Surfaces Displays Characteristic Features of Hop Diffusion

Parmryd, Ingela, Adler, Jeremy, Sintorn, Ida-Maria, Strand, Robin

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 36 KB

english, 2013

25

Quantification of Colocalisation; Co-Occurrence, Correlation, Empty Voxels, Regions of Interest and Thresholding

Adler, Jeremy, Parmryd, Ingela

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 41 KB

english, 2014

26

Actin Filaments Attachment to the Plasma Membrane Cause the Formation of Ordered Lipid Domains in Live Cells

Ashrafzadeh, Parham, Dinic, Jelena, Parmryd, Ingela

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 36 KB

english, 2014

27

Diffusion Measurements on Non Flat Surfaces Require Analysis of the Shortest Within Surface Distance

Parmryd, Ingela, Adler, Jeremy

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 77 KB

english, 2011

28

The Effect of Membrane Spanning Peptides on Laurdan and Di-4-ANEPPDHQ Emission Spectra

Dinic, Jelena, Biverståhl, Henrik, Mäler, Lena, Parmryd, Ingela

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 55 KB

english, 2010

29

Protein Prenylation in Spinach Chloroplasts

Ingela Parmryd, Bertil Andersson and Gustav Dallner

Journal:

Proceedings of the National Academy of Sciences

Year:

1999

Language:

english

File:

PDF, 1.46 MB

english, 1999

30

Consequences of membrane topography

Parmryd, Ingela, Önfelt, Björn

Journal:

Year:

2013

Language:

english

File:

PDF, 370 KB

english, 2013

31

Protein prenylation in spinach chloroplasts

Parmryd, I., Andersson, B., Dallner, G.

Journal:

Proceedings of the National Academy of Sciences

Year:

1999

Language:

english

File:

PDF, 139 KB

english, 1999

32

The T cell receptor resides in ordered plasma membrane nanodomains that aggregate upon patching of the receptor

Dinic, Jelena, Riehl, Astrid, Adler, Jeremy, Parmryd, Ingela

Journal:

Scientific Reports

Year:

2015

Language:

english

File:

PDF, 719 KB

english, 2015

33

Methods applicable to membrane nanodomain studies?

Ashrafzadeh, Parham, Parmryd, Ingela

Journal:

Essays in Biochemistry

Year:

2015

Language:

english

File:

PDF, 481 KB

english, 2015

34

Isoprenylation of Plant Proteins in Vivo: ISOPRENYLATED PROTEINS ARE ABUNDANT IN THE MITOCHONDRIA AND NUCLEI OF SPINACH

Shipton, C. A., Parmryd, I., Swiezewska, E., Andersson, B., Dallner, G.

Journal:

Journal of Biological Chemistry

Year:

1995

File:

PDF, 6.47 MB

1995

35

The T Cell Receptor Resides in Ordered Plasma Membrane Nanodomains that Aggregate Upon T Cell Activation

Parmryd, Ingela, Riehl, Astrid, Dinic, Jelena, Adler, Jeremy

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 44 KB

english, 2015

36

Lipid rafts and T cell receptor signalling

Magee, A.I., Pirinen, N., Patel, R., Janes, P., Ley, S., Parmryd, I.

Journal:

Biochemical Society Transactions

Year:

2001

Language:

english

File:

PDF, 67 KB

english, 2001

37

Organization of isoprenoid biosynthesis

Parmryd, I., Dallner, G.

Journal:

Biochemical Society Transactions

Year:

1996

Language:

english

File:

PDF, 512 KB

english, 1996

38

PHYTYLATION - A CHLOROPLASTIC VERSION OF PROTEIN PRENYLATION

Journal:

Biochemical Society Transactions

Year:

2000

Language:

english

File:

PDF, 90 KB

english, 2000

39

Colocalisation - the Tale of Co-Occurrence and Correlation

Parmryd, Ingela, Adler, Jeremy

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 37 KB

english, 2017

40

Immunogenic and Antioxidant Effects of a Pathogen-Associated Prenyl Pyrophosphate in Anopheles gambiae

Lindberg, Bo G., Merritt, Eleanor A., Rayl, Melanie, Liu, Chenxiao, Parmryd, Ingela, Olofsson, Berit, Faye, Ingrid, Leulier, François

Journal:

Year:

2013

Language:

english

File:

PDF, 1.52 MB

english, 2013

41

Interleaflet Coupling, Pinning, and Leaflet Asymmetry—Major Players in Plasma Membrane Nanodomain Formation

Fujimoto, Toyoshi, Parmryd, Ingela

Journal:

Frontiers in Cell and Developmental Biology

Year:

2017

Language:

english

File:

PDF, 676 KB

english, 2017

42

Vγ9Vδ2 T cells proliferate in response to phosphoantigens released from erythrocytes infected with asexual and gametocyte stage Plasmodium falciparum

Liu, Chenxiao, Emami, S. Noushin, Pettersson, Jean, Ranford-Cartwright, Lisa, Faye, Ingrid, Parmryd, Ingela

Journal:

Cellular Immunology

Year:

2018

Language:

english

File:

PDF, 1.33 MB

english, 2018

43

Membrane Topography can Cause Apparent Clustering - Identification and Differentiation from Genuine Clustering

Parmryd, Ingela, Adler, Jeremy, Bernhem, Kristoffer

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 42 KB

english, 2018

44

Membrane Topography Creates the Appearance of Anomalous Diffusion

Parmryd, Ingela, Adler, Jeremy, Sintorn, Ida-Maria, Strand, Robin

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 39 KB

english, 2019

45

Differentiating between Membrane Topography and Molecular Clustering

Parmryd, Ingela, Eriksson, Sven-GÃ¶ran, Bernhem, Kristoffer, Adler, Jeremy

Journal:

Biophysical Journal

Year:

2020

File:

PDF, 41 KB

2020

46

Variations in Plasma Membrane Topography Can Explain Heterogenous Diffusion Coefficients Obtained by Fluorescence Correlation Spectroscopy

Gesper, Astrid, Wennmalm, Stefan, Hagemann, Philipp, Eriksson, Sven-GÃ¶ran, Happel, Patrick, Parmryd, Ingela

Journal:

Frontiers in Cell and Developmental Biology

Year:

2020

File:

PDF, 2.49 MB

2020

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